miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|27249878|gb|BJ568050.1|BJ568050 TCTTAATGACTTAATTAGTTGTGAAAGATCGATCAGAATTAATAATACATAATAATAATAATAATTATACATAATTAATA
CAGCACACCTAAAATTATCCGAACATACTAAGAATGTATAGCATCATGAGCAATCAGCCTTGGAATCTTAGCAGATTGAC
TGCTCATGATGTTATAGCTAATATAATTTCTCTAGCTAATTCCCTAGTAGGTTAATAATTTTTAGTGTGCTGTACGCAAC
GTGGGATAATAATCAACTTAACGTAATGTAACCACATTATACGTAGTTTTAATTTTGTACTCTGATCTGATATGATCTTA
AGTTTCATGATCGGAAACCTCCTCCCCCGAACGCCGCCGGAGCCCAATAGTCCGCCCCGTTATCACTCCCGACTTGAAGC
GTGCATGATATCGGCACAAGACACAACCCTCTACTCCTCAAATCCTTCTTTGCTTCTTCATCACCATCCTGCGGCTGATG
ATGATCAGATGTTCCTTTCCTCTTCAAACAGTTGTCATTTAAGAGCTGACCAGGGTCTTCAGGGAATAAACTATTCCTCT
CTGCACCTTGCACAAATGACTGTTGTTGATGCCTCATGTTATTTCCTGATCCATTGCCCAAGTAGGGCAAGCTAAGGGCC
TCAATCTGGCTTTGAAGGAATCTAATGTACCCAATAGCTTCTAACA




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  157 bits (397), Expect = 6e-38
 Identities = 82/117 (70%), Positives = 91/117 (77%), Gaps = 1/117 (0%)
 Frame = -3

Query: 681 EAIGYIRFLQSQIEALSLPYLGNGSGNNMRHQQQSFVQGAERNSLFPEDPGQLLNDNCLK 502
           EAIGYIRFLQSQIEALS PY G  +  NMRHQQ   +QG +R+ +FPEDPGQL+ND C+K
Sbjct: 294 EAIGYIRFLQSQIEALSHPYFGTTASGNMRHQQH--LQG-DRSCIFPEDPGQLVNDQCMK 350

Query: 501 RKGTSDHHQP-QDGDEEAKKDLRSRGLCLVPISCTLQVGSDNGADYWAPAAFGGGGF 334
           R+G S      Q+  EE KKDLRSRGLCLVPISCTLQVGSDNGADYWAP A G  GF
Sbjct: 351 RRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAP-ALGSAGF 406